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Practical Guide To Principal Component Methods in R
Although there are several good books on principal component methods (PCMs) and related topics, we felt that many of them are either too theoretical or too advanced. This book provides a solid practical guidance to summarize, visualize and interpret the most important information in a large multivariate data sets, using principal component methods in R. The visualization is based on the factoextra R package that we developed for creating easily beautiful ggplot2-based graphs from the output of PCMs. This book contains 4 parts. Part I provides a quick introduction to R and presents the key features of FactoMineR and factoextra. Part II describes classical principal component methods to analyz...
Practical Guide to Cluster Analysis in R
Although there are several good books on unsupervised machine learning, we felt that many of them are too theoretical. This book provides practical guide to cluster analysis, elegant visualization and interpretation. It contains 5 parts. Part I provides a quick introduction to R and presents required R packages, as well as, data formats and dissimilarity measures for cluster analysis and visualization. Part II covers partitioning clustering methods, which subdivide the data sets into a set of k groups, where k is the number of groups pre-specified by the analyst. Partitioning clustering approaches include: K-means, K-Medoids (PAM) and CLARA algorithms. In Part III, we consider hierarchical c...
Network Analysis and Visualization in R
Social network analysis is used to investigate the inter-relationship between entities. Examples of network structures, include: social media networks, friendship networks and collaboration networks. This book provides a quick start guide to network analysis and visualization in R. You'll learn, how to: - Create static and interactive network graphs using modern R packages. - Change the layout of network graphs. - Detect important or central entities in a network graph. - Detect community (or cluster) in a network.
Complete Guide to 3D Plots in R
This book provides a complete guide for visualizing a data in 3 dimensions (3D) using R software. It contains 2 main parts and 7 chapters describing how to draw static and interactive 3D plots. - The chapter 1 is about data preparation for 3D plot - In chapter 2, we describe how to create easily basic static 3D scatter plots. We provide R codes for changing: 1) main and axis titles; 2) the appearance of the plot (point colors, labels and shapes, legend position, ...) - Chapter 3 presents how to create advanced static 3D plots including 3D scatter plots with confidence interval, 3D line plots, 3D texts, 3D barplots, 3D histograms and 3D arrows. - Chapter 4 describes the required package for d...
Machine Learning Essentials
Discovering knowledge from big multivariate data, recorded every days, requires specialized machine learning techniques. This book presents an easy to use practical guide in R to compute the most popular machine learning methods for exploring real word data sets, as well as, for building predictive models. The main parts of the book include: A) Unsupervised learning methods, to explore and discover knowledge from a large multivariate data set using clustering and principal component methods. You will learn hierarchical clustering, k-means, principal component analysis and correspondence analysis methods. B) Regression analysis, to predict a quantitative outcome value using linear regression ...
ggplot2: Guide to Create Beautiful Graphics in R
This book contains 6 parts providing step-by-step guides to create easily beautiful graphics using the R package ggplot2. The first part provides a quick introduction to R and to the ggplot2 plotting system. From part II to IV, we show how to create and customize several graph types including: density plots, histogram plots, ECDF, QQ plots, scatter plots, box plots, violin plots, dot plots, strip charts, line plots, bar plots and pie charts. Part V covers how to change graphical parameters including: main title and axis labels; legend titles, position and appearance; colors; point shapes, colors and size; line types; axis limits and transformations: log and sqrt; axis ticks : customize tick ...
R Graphics Essentials for Great Data Visualization
Data visualization is one of the most important part of data science. Many books and courses present a catalogue of graphics but they don't teach you which charts to use according to the type of the data. In this book, we start by presenting the key graphic systems and packages available in R, including R base graphs, lattice and ggplot2 plotting systems. Next, we provide more than 200 practical examples to create great graphics for the right data using either the ggplot2 package and extensions or the traditional R graphics. With this book, you 'll learn: - How to quickly create beautiful graphics using ggplot2 packages - How to properly customize and annotate the plots - Type of graphics for visualizing categorical and continuous variables - How to add automatically p-values to box plots, bar plots and alternatives - How to add marginal density plots and correlation coefficients to scatter plots - Key methods for analyzing and visualizing multivariate data - R functions and packages for plotting time series data - How to combine multiple plots on one page to create production-quality figures.
Metal Nanocomposites in Nanotherapeutics for Oxidative Stress-Induced Metabolic Disorders
This book highlights the role and mechanism of different metal nanocomposites toward oxidative stress-induced metabolic disorders including metabolic pathways affected by oxidative stress and related pathophysiology. The book includes an illustrative discussion about the methods of synthesis, characterization, and biomedical applications of metal nanocomposites. It focuses on the therapeutic approaches for metabolic disorders due to oxidative stress by nano delivery systems. Moreover, the book includes chapters on nanotherapeutic approaches toward different diseases, including diabetes mellitus, obesity, cardiovascular disorders, cancers, and neurodegenerative diseases such as Alzheimer's di...
Novel therapeutic approaches for gastrointestinal malignancies
This book provides an up-to-date overview of gastrointestinal malignancies, including prevention, early detection, intervention, and life-extending therapeutics. It also assesses various biomarkers used for diagnostics, prognostics and prediction of response to chemoresistance. Further, it discusses the latest trends in the use of small-molecule targeted therapies and immunotherapies as single agents or combination with other treatments. Since resistance to radiation and chemotherapy contribute to the high recurrence and poor survival rates, improving the outcome for GI malignancies is dependent on the introduction of new biomarkers and therapeutic agents. Lastly, the book systematically investigates novel theranostics approaches using nanotechnology for the detection, diagnosis, and personalized treatment of GI malignancies.
Hands-On Ensemble Learning with R
Explore powerful R packages to create predictive models using ensemble methods Key Features Implement machine learning algorithms to build ensemble-efficient models Explore powerful R packages to create predictive models using ensemble methods Learn to build ensemble models on large datasets using a practical approach Book Description Ensemble techniques are used for combining two or more similar or dissimilar machine learning algorithms to create a stronger model. Such a model delivers superior prediction power and can give your datasets a boost in accuracy. Hands-On Ensemble Learning with R begins with the important statistical resampling methods. You will then walk through the central tri...
