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Mechanisms Driving Karyotype Evolution and Genomic Architecture
Understanding of the origin of species and their adaptability to new environments is one of the main questions in biology. This is fueled by the ongoing debate on species concepts and facilitated by the availability of an unprecedented large number of genomic resources. Genomes are organized into chromosomes, where significant variations in number and morphology are observed among species due to large-scale structural variants such as inversions, translocations, fusions, and fissions. This genomic reshuffling provides, in the long term, new chromosomal forms on which natural selection can act upon, contributing to the origin of biodiversity. This book contains mainly articles, reviews, and an opinion piece that explore numerous aspects of genome plasticity among taxa that will help in understanding the dynamics of genome composition, the evolutionary relationships between species and, in the long run, speciation.
Cytogenomics
Cytogenomics demonstrates that chromosomes are crucial in understanding the human genome and that new high-throughput approaches are central to advancing cytogenetics in the 21st century. After an introduction to (molecular) cytogenetics, being the basic of all cytogenomic research, this book highlights the strengths and newfound advantages of cytogenomic research methods and technologies, enabling researchers to jump-start their own projects and more effectively gather and interpret chromosomal data. Methods discussed include banding and molecular cytogenetics, molecular combing, molecular karyotyping, next-generation sequencing, epigenetic study approaches, optical mapping/karyomapping, an...
Fish Karyotypes
As the largest group of extant vertebrates, fish offer an almost limitless number of striking examples of evolutionary adaptation to environmental and biotic selection pressure. The most diverse of all vertebrate groups, the higher taxa of fish traditionally have been classified by morphology and paleontology, with a much smaller input of cytogenetic information. DNA sequence data are exerting an increasingly strong influence on modern fish systematics, challenging the classification of numerous higher taxa ranging from genera to orders. The most fruitful approach, however, involves synthetic analyses of morphology, molecular phylogenetics, comparative karyology, and genome size. Karyotypes of more than 3400 species/subspecies are arranged here by fish systematics and include a list of genome size, sex chromosomes, B chromosomes, polyploidy, and locality of material fish, among others. This volume enables both beginners and advanced researchers to survey the existing literature and facilitates the implementation of an integrative approach to fish systematics. The first book on fish chromosomes in nearly 15 years, it is also the most comprehensive.
Genetics, Evolution, and Conservation of Neotropical Fishes
Fish represent the most ancestral and specious group of vertebrates, and occupy more diverse aquatic environments around the world. Ichthyofauna is extremely diverse, especially in megadiverse countries occupying biogeographical regions such as the Neotropical Region, which covers an extensive area between North and South America. Much of this biodiversity will be extinct, even before science knows any aspect of its biology. Like this, Neotropical fish genetics started in the end of the 70’s with papers studying the chromosomes of Hoplias malabaricus (Family Erythrinidae) and the karyotype variation among three genera of the family Anostomidae. The topic at that time was concentrated in tw...
Fluorescence In Situ Hybridization (FISH) - Application Guide
This book is a unique source of information on the present state of the exciting field of molecular cytogenetics and how it can be applied in research and diagnostics. The basic techniques of fluorescence in situ hybridization and primed in situ hybridization (PRINS) are outlined, the multiple approaches and probe sets that are now available for these techniques are described, and applications of them are presented in 36 chapters by authors from ten different countries around the world. The book not only provides the reader with basic and background knowledge on the topic, but also gives detailed protocols that show how molecular cytogenetics is currently performed by specialists in this fie...
GGE Biplot Analysis
Research data is expensive and precious, yet it is seldom fully utilized due to our ability of comprehension. Graphical display is desirable, if not absolutely necessary, for fully understanding large data sets with complex interconnectedness and interactions. The newly developed GGE biplot methodology is a superior approach to the graphical analys
The Future of Rice Demand: Quality Beyond Productivity
This book aims to provide an overview of the challenges and available technologies to improve rice and provide a response to the challenge posed by increasing world population and the resultant food shortages. Nutritional aspects of rice products and omics and the molecular technologies currently being used are covered in depth. As a staple food for over 50% of the world ́s population, an estimated 9 billion people will need to be fed by 2050, and healthy and uncontaminated foods need to reach consumers in developed and developing countries.This makes quality beyond productivity incredibly important and is one of the overriding themes of this work. The Future of Rice Demand: Quality Beyond ...
Sustainable Degradation of Lignocellulosic Biomass
This book provides important aspects of sustainable degradation of lignocellulosic biomass which has a pivotal role for the economic production of several value-added products and biofuels with safe environment. Different pretreatment techniques and enzymatic hydrolysis process along with the characterization of cell wall components have been discussed broadly. The following features of this book attribute its distinctiveness: This book comprehensively covers the improvement in methodologies for the biomass pretreatment, hemicellulose and cellulose breakdown into fermentable sugars, the analytical methods for biomass characterization, and bioconversion of cellulosics into biofuels. In addition, mechanistic analysis of biomass pretreatment and enzymatic hydrolysis have been discussed in details, highlighting key factors influencing these processes at industrial scale.
