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Symbolic Approaches to Modeling and Analysis of Biological Systems
Systems Biology is an approach to biology that involves understanding the complexity of interactions among biological entities within a systemic whole. The goal is to understand the emergence of physiological or functional properties. Symbolic Approaches to Modeling and Analysis of Biological Systems presents contributions of formal methods from computer science for modeling the dynamics of biological systems. It deals more specifically with symbolic methods, i.e. methods that can establish the qualitative properties of models. This book presents different approaches related to semantics, language, modeling and their link with data, and allows us to examine the fundamental problems and challenges that biological systems are facing. The first part of the book presents works that rely on various available data to build models, while the second part gathers contributions surrounding issues of semantics and formal methods.
Types for Proofs and Programs
This book constitutes the thoroughly refereed post-proceedings of the Third International Workshop of the Types Working Group, TYPES 2003, held in Torino, Italy in April/May 2003. The 25 revised full papers presented were carefully selected during two rounds of reviewing and improvement. All current issues in type theory and type systems and their applications to programming, systems design, and proof theory are addressed. Among the systems dealt with are Isabelle/Isar, PAF!, and Coq.
Programming Languages and Systems
This book constitutes the refereed proceedings of the 16th European Symposium on Programming, ESOP 2007, held in Braga, Portugal in March/April 2007. It covers models and languages for Web services, verification, term rewriting, language based security, logics and correctness proofs, static analysis and abstract interpretation, semantic theories for object oriented languages, process algebraic techniques, applicative programming, and types for systems properties.
CONCUR 2009 - Concurrency Theory
This volume contains the proceedings of the 20th Conference on Concurrency Theory (CONCUR 2009), held in Bologna, September 1–4, 2009. The purpose of the CONCUR conference is to bring together researchers, developers, and s- dentsinordertoadvancethetheoryofconcurrencyandpromoteitsapplications. This year the CONCUR conference was in its 20th edition, and to celebrate 20 years of CONCUR, the conference program included a special session organized by the IFIP Working Groups 1.8 “Concurrency Theory” and 2.2 “Formal - scriptionofProgrammingConcepts”aswellas aninvitedlecturegivenby Robin Milner, one of the fathers of the concurrency theory research area. This edition of the conference at...
FSTTCS 2004: Foundations of Software Technology and Theoretical Computer Science
This book constitutes the refereed proceedings of the 24th International Conference on the Foundations of Software Technology and Theoretical Computer Science, FSTTCS 2004, held in Chennai, India, in December 2004. The 35 revised full papers presented together with 5 invited papers were carefully reviewed and selected from 176 submissions. The papers address a broad variety of current issues in software science, programming theory, systems design and analysis, formal methods, mathematical logic, mathematical foundations, discrete mathematics, combinatorial mathematics, complexity theory, automata theory, and theoretical computer science in general.
Transactions on Computational Systems Biology VI
The 5th Transactions on Computational Systems Biology volume, edited by Gordon Plotkin, features carefully selected and enhanced contributions initially presented at the 2005 IEEE International Conference on Granular Computing. The 9 papers selected for this special issue discuss various aspects of computational methods, algorithm and techniques in bioinformatics such as gene expression analysis, biomedical literature mining and natural language processing, protein structure prediction, biological database management and biomedical information retrieval.
Automata, Languages and Programming
This book constitutes the refereed proceedings of the 29th International Colloquium on Automata, Languages and Programming, ICALP 2002, held in Malaga, Spain, in July 2002.The 83 revised full papers presented together with 7 invited papers were carefully reviewed and selected from a total of 269 submissions. All current aspects of theoretical computer science are addressed and major new results are presented.
Computational Methods in Systems Biology
This book constitutes the refereed proceedings of the 6th International Conference on Computational Methods in Systems Biology, CMSB 2008, held in Rostock, Germany, in September 2008. The 21 revised full papers presented together with the summaries of 5 invited papers were carefully reviewed and selected from more than 60 submissions. The papers cover theoretical or applied contributions that are motivated by a biological question focusing on modeling approaches, including process algebra, simulation approaches, analysis methods, in particular model checking and flux analysis, and case studies.
ACM Transactions on Programming Languages and Systems
Contains articles on programming languages and their semantics, programming systems, storage allocations and garbage collection, languages and methods for writing specifications, testing and verification methods, and algorithms specifically related to the implementation of language processors.
