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DNA Computing
Biomolecular computing is an interdisciplinary ?eld that draws together mol- ular biology, DNA nanotechnology, chemistry, physics, computer science and mathematics. Theannualinternationalmeeting onDNA-based computationhas been an exciting forum where scientists of di?erent backgrounds who share a common interest in biomolecular computing can meet and discuss their latest results. The central goal of this conference is to bring together experimentalists and theoreticians whose insights can calibrate each others' approaches. The 9th Annual International Meeting on DNA Based Computers was held during June 1-4, 2003 in the University of Wisconsin, Madison, USA. The meeting had 106 registered par...
DNA Based Computers V
This proceedings volume presents the talks from the Fifth Annual Meeting on DNA Based Computers held at MIT. The conference brought together researchers and theorists from many disciplines who shared research results in biomolecular computation. Two styles of DNA computing were explored at the conference: 1) DNA computing based on combinatorial search, where randomly created DNA strands are used to encode potential solutions to a problem, and constraints induced by the problem are used to identify DNA strands that are solution witnesses; and 2) DNA computing based on finite-state machines, where the state of a computation is encoded in DNA, which controls the biochemical steps that advance the DNA-based machine from state to state. Featured articles include discussions on the formula satisfiability problem, self-assembly and nanomachines, simulation and design of molecular systems, and new theoretical approaches.
Advances in Artificial Life
TheArti?cialLifetermappearedmorethan20yearsagoinasmallcornerofNew Mexico, USA. Since then the area has developed dramatically, many researchers joining enthusiastically and research groups sprouting everywhere. This frenetic activity led to the emergence of several strands that are now established ?elds in themselves. We are now reaching a stage that one may describe as maturer: with more rigour, more benchmarks, more results, more stringent acceptance criteria, more applications, in brief, more sound science. This, which is the n- ural path of all new areas, comes at a price, however. A certain enthusiasm, a certain adventurousness from the early years is fading and may have been lost on th...
DNA Computing
"..., the 11th International Meeting on DNA Computing was held June 6–9, 2005 at the University ofWestern Ontario in London, Ontario, Canada.
Evolution as Computation
The study of the genetic basis for evolution has flourished in this century, as well as our understanding of the evolvability and programmability of biological systems. Genetic algorithms meanwhile grew out of the realization that a computer program could use the biologically-inspired processes of mutation, recombination, and selection to solve hard optimization problems. Genetic and evolutionary programming provide further approaches to a wide variety of computational problems. A synthesis of these experiences reveals fundamental insights into both the computational nature of biological evolution and processes of importance to computer science. Topics include biological models of nucleic acid information processing and genome evolution; molecules, cells, and metabolic circuits that compute logical relationships; the origin and evolution of the genetic code; and the interface with genetic algorithms and genetic and evolutionary programming.
DNA based computers
This volume presents the proceedings of a conference held at Princeton University in April 1995 as part of the DIMACS Special Year on Mathematical Support for Molecular Biology. The subject of the conference was the new area of DNA based computing. DNA based computing is the study of using DNA strands as individual computers. The concept was initiated by Leonard Adleman's paper in Science in November 1994.
DNA Computing
The papers in this volume were presented at the 6th International Meeting on DNA Based Computers, organized by the Leiden Center for Natural Computing and held from June 13 to June 17, 2000 at The Lorentz Center, University of Leiden, Leiden, The Netherlands. DNA Computing is a novel and fascinating development at the interface of computer science and molecular biology. It has emerged in recent years, not simply as an exciting technology for information processing, but also as a catalyst for knowledge transfer between information processing, nanotechnology, and biology. This area of research has the potential to change our understanding of the theory and practice of computing. The call for p...
Visions of DNA Nanotechnology at 40 for the Next 40
This open access book provides a unique and state-of-the-art view on DNA nanotechnology with an eye toward future developments. Intended as a tribute to Nadrian C. Seeman, who founded the field of DNA nanotechnology, the content is an exciting mixture of technical and non-technical material, reviews, tutorials, perspectives, new findings, and open questions. The book aims to inspire current researchers to sit back and think about the big picture, while also enticing new researchers to enter the field. Most of all, the book captures voices from a unique moment in time: 40 years after the publication of the first paper that envisioned DNA nanotechnology. From this vantage point, what are the u...
Algorithmic Bioprocesses
A fundamental understanding of algorithmic bioprocesses is key to learning how information processing occurs in nature at the cell level. The field is concerned with the interactions between computer science on the one hand and biology, chemistry, and DNA-oriented nanoscience on the other. In particular, this book offers a comprehensive overview of research into algorithmic self-assembly, RNA folding, the algorithmic foundations for biochemical reactions, and the algorithmic nature of developmental processes. The editors of the book invited 36 chapters, written by the leading researchers in this area, and their contributions include detailed tutorials on the main topics, surveys of the state...
Parallel and Distributed Processing
This volume contains the proceedings from the workshops held in conjunction with the IEEE International Parallel and Distributed Processing Symposium, IPDPS 2000, on 1-5 May 2000 in Cancun, Mexico. The workshopsprovidea forum for bringing together researchers,practiti- ers, and designers from various backgrounds to discuss the state of the art in parallelism.Theyfocusondi erentaspectsofparallelism,fromruntimesystems to formal methods, from optics to irregular problems, from biology to networks of personal computers, from embedded systems to programming environments; the following workshops are represented in this volume: { Workshop on Personal Computer Based Networks of Workstations { Worksh...
