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Integration of NGS in clinical and public health microbiology workflows: applications, compliance, quality considerations
The expansion of NGS implementation in clinical and public health practice accelerated drastically during the SARS-CoV-2 pandemic, where NGS has been playing a vital role in tracking dangerous strains of the virus. NGS applications not only influenced public health decision-making but also have been crossing into the clinical field with individual patients’ results being potentially available to the physicians. Hence, the topic of implementation of NGS methods in clinical and public health microbiology, its challenges and special considerations, is as timely as ever. The use of Next Generation Sequencing (NGS) in clinical and public health microbiology laboratories has been steadily expanding in the past decade. However, this progress has been held back by multiple logistical challenges, like the absence of regulatory compliance framework, lack of clear quality guidelines, the need for standardization and interoperability between laboratories, as well as cost and turn-around-time limitations.
Advances and Insights in the Diagnosis of Viral Infections and Vaccines Development in Animals
Viral infections in animals occasionally develop potentially fatal diseases that affect almost all organs. Especially in zoonotic diseases, the causative agents that usually exist in animals can be transmitted between animal species to humans directly or via a vector. Throughout recent history, disease outbreaks and pandemics including SARS, H7N9, Ebola, and COVID-19, have led to a dramatic loss of human life worldwide and harmed economic growth. The most effective strategies for the control of disease are vaccination and early diagnosis. Vaccines directed against viral and bacterial pathogens prevent catastrophic losses of life in humans, other animals, and plants, and are considered among ...
Avian Influenza and Newcastle Disease
Avian Influenza (AI) and Newcastle Disease (ND) are two devastating diseases of poultry, which cause losses to the poultry industry and influence the liveability of rural communities worldwide. Following the H5N1 epidemic they appear to be endemic at least in Asia, Eastern Europe, The Middle East and Africa. Particularly in case of AI outbreaks it is essential that infection is diagnosed promptly and that isolates are made available to the international scientific community. Currently, several organisations including OIE, FAO and the EC have organised training courses in affected areas. However, often these courses do not cover all aspects of AI/ND diagnosis but only certain aspects. This results in fragmented areas of knowledge and in the application of different diagnostic protocols in different parts of the world. The objective of this book is to provide a comprehensive approach to AI diagnosis ranging from the clinical elements that should trigger a suspicion in the field, to the post mortem technique, collection of samples, processing/ shipment of specimens, virological, serological and molecular diagnosis and guidelines for notification.
Real-time Systems
This book collects the research work of leading-edge researchers and practitioners in the areas of analysis, synthesis, design and implementation of real-time systems with applications in various industrial fields. Their works are grouped into six parts, together encompassing twenty chapters. Each part is devoted to a mainstream subject, the chapters therein developing one of the major aspects of real-time system theory, modeling, design, and practical applications. Starting with a general approach in the area of formalization of real-time systems, and setting the foundations for a general systemic theory of those systems, the book covers everything from building modeling frameworks for various types of real-time systems, to verification, and synthesis. Other parts of the book deal with subjects related to tools and applications of these systems. A special part is dedicated to languages used for their modeling and design. The applications presented in the book reveal precious insights into practitioners' secrets.
Marek's Disease
Marek's disease is a form of cancer of poultry caused by an important herpesvirus (MDV). It continues to be a threat to poultry health and welfare and worldwide losses are estimated to be US$ 1 billion annually. Marek's Disease provides a timely review of the problems of Marek's disease with descriptions of the complex viral life cycle, how MDV targets different types of white blood cells, and details of the virus structure, its genes and proteins. The multiplicity of factors contributing to susceptibility is explored in detail Vaccination - the problems arising from current vaccination strategies and how these can be improved and made sustainable in future The lessons learned in the control of MD over the past 30 years, and how we can use MD as a model for other animal and human diseases is discussed
A Laboratory Manual for the Isolation, Identification and Characterization of Avian Pathogens
Manual for the isolation, identification and characterization of avian pathogens
Laboratory Biorisk Management
Over the past two decades bioscience facilities worldwide have experienced multiple safety and security incidents, including many notable incidents at so-called sophisticated facilities in North America and Western Europe. This demonstrates that a system based solely on biosafety levels and security regulations may not be sufficient. Setting the stage for a substantively different approach for managing the risks of working with biological agents in laboratories, Laboratory Biorisk Management: Biosafety and Biosecurity introduces the concept of biorisk management--a new paradigm that encompasses both laboratory biosafety and biosecurity. The book also provides laboratory managers and director...
Next-Generation Sequencing Data Analysis
A Practical Guide to the Highly Dynamic Area of Massively Parallel SequencingThe development of genome and transcriptome sequencing technologies has led to a paradigm shift in life science research and disease diagnosis and prevention. Scientists are now able to see how human diseases and phenotypic changes are connected to DNA mutation, polymorphi
A Laboratory Manual for the Isolation and Identification of Avian Pathogens
Bacterial diseases and pathogens; Fungal diseases and pathogens; Viral diseases and pathogens.
