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Mathematics of DNA Structure, Function and Interactions
Propelled by the success of the sequencing of the human and many related genomes, molecular and cellular biology has delivered significant scientific breakthroughs. Mathematics (broadly defined) continues to play a major role in this effort, helping to discover the secrets of life by working collaboratively with bench biologists, chemists and physicists. Because of its outstanding record of interdisciplinary research and training, the IMA was an ideal venue for the 2007-2008 IMA thematic year on Mathematics of Molecular and Cellular Biology. The kickoff event for this thematic year was a tutorial on Mathematics of Nucleic Acids, followed by the workshop Mathematics of Molecular and Cellular ...
Biological Fluid Dynamics: Modeling, Computations, and Applications
This volume contains the Proceedings of the AMS Special Session on Biological Fluid Dynamics: Modeling, Computation, and Applications, held on October 13, 2012, at Tulane University, New Orleans, Louisiana. In recent years, there has been increasing interest in the development and application of advanced computational techniques for simulating fluid motion driven by immersed flexible structures. That interest is motivated, in large part, by the multitude of applications in physiology and biology. In some biological systems, fluid motion is driven by active biological tissues, which are typically constructed of fibers that are surrounded by fluid. Not only do the fibers hold the tissues toget...
Complex Systems and Computational Biology Approaches to Acute Inflammation
This second edition expands upon and updates the vital research covered in its predecessor, by presenting state-of-the-art multidisciplinary and systems-oriented approaches to complex diseases arising from and driven by the acute inflammatory response. The chapters in this volume provide an introduction to different types of computational modeling, and how these methods can be applied to specific inflammatory diseases, with a focus on providing readers a roadmap for integrating advanced mathematical and computational techniques with traditional experimental methods. In this second edition, we cover both well-established and emerging modeling methods, especially state-of-the-art machine learn...
Continuum Models and Discrete Systems
Proceedings of the NATO ARW, Shoresh, Israel, from 30 June to 4 July 2003
Mathematics and Life Sciences
The book provides a unique collection of in-depth mathematical, statistical, and modeling methods and techniques for life sciences, as well as their applications in a number of areas within life sciences. The book provides also with a range of new ideas that represent emerging frontiers in life sciences where the application of such quantitative methods and techniques is becoming increasingly important. Many areas within life sciences are becoming increasingly quantitative and the progress in those areas will be more and more dependent on the successful development of advanced mathematical, statistical and modelling methodologies and techniques. The state-of-the-art developments in such meth...
Nonlinear Conservation Laws and Applications
This volume contains the proceedings of the Summer Program on Nonlinear Conservation Laws and Applications held at the IMA on July 13--31, 2009. Hyperbolic conservation laws is a classical subject, which has experienced vigorous growth in recent years. The present collection provides a timely survey of the state of the art in this exciting field, and a comprehensive outlook on open problems. Contributions of more theoretical nature cover the following topics: global existence and uniqueness theory of one-dimensional systems, multidimensional conservation laws in several space variables and approximations of their solutions, mathematical analysis of fluid motion, stability and dynamics of vis...
Handbook of Dynamic Data Driven Applications Systems
This Second Volume in the series Handbook of Dynamic Data Driven Applications Systems (DDDAS) expands the scope of the methods and the application areas presented in the first Volume and aims to provide additional and extended content of the increasing set of science and engineering advances for new capabilities enabled through DDDAS. The methods and examples of breakthroughs presented in the book series capture the DDDAS paradigm and its scientific and technological impact and benefits. The DDDAS paradigm and the ensuing DDDAS-based frameworks for systems’ analysis and design have been shown to engender new and advanced capabilities for understanding, analysis, and management of engineere...
Mixed Integer Nonlinear Programming
Many engineering, operations, and scientific applications include a mixture of discrete and continuous decision variables and nonlinear relationships involving the decision variables that have a pronounced effect on the set of feasible and optimal solutions. Mixed-integer nonlinear programming (MINLP) problems combine the numerical difficulties of handling nonlinear functions with the challenge of optimizing in the context of nonconvex functions and discrete variables. MINLP is one of the most flexible modeling paradigms available for optimization; but because its scope is so broad, in the most general cases it is hopelessly intractable. Nonetheless, an expanding body of researchers and practitioners — including chemical engineers, operations researchers, industrial engineers, mechanical engineers, economists, statisticians, computer scientists, operations managers, and mathematical programmers — are interested in solving large-scale MINLP instances.
Towards Higher Categories
The purpose of this book is to give background for those who would like to delve into some higher category theory. It is not a primer on higher category theory itself. It begins with a paper by John Baez and Michael Shulman which explores informally, by analogy and direct connection, how cohomology and other tools of algebraic topology are seen through the eyes of n-category theory. The idea is to give some of the motivations behind this subject. There are then two survey articles, by Julie Bergner and Simona Paoli, about (infinity,1) categories and about the algebraic modelling of homotopy n-types. These are areas that are particularly well understood, and where a fully integrated theory ex...
Natural Locomotion in Fluids and on Surfaces
This volume developed from a Workshop on Natural Locomotion in Fluids and on Surfaces: Swimming, Flying, and Sliding which was held at the Institute for Mathematics and its Applications (IMA) at the University of Minnesota, from June 1-5, 2010. The subject matter ranged widely from observational data to theoretical mechanics, and reflected the broad scope of the workshop. In both the prepared presentations and in the informal discussions, the workshop engaged exchanges across disciplines and invited a lively interaction between modelers and observers. The articles in this volume were invited and fully refereed. They provide a representative if necessarily incomplete account of the field of natural locomotion during a period of rapid growth and expansion. The papers presented at the workshop, and the contributions to the present volume, can be roughly divided into those pertaining to swimming on the scale of marine organisms, swimming of microorganisms at low Reynolds numbers, animal flight, and sliding and other related examples of locomotion.
