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Biological Network Analysis
  • Language: en
  • Pages: 210

Biological Network Analysis

Biological Network Analysis: Trends, Approaches, Graph Theory, and Algorithms considers three major biological networks, including Gene Regulatory Networks (GRN), Protein-Protein Interaction Networks (PPIN), and Human Brain Connectomes. The book's authors discuss various graph theoretic and data analytics approaches used to analyze these networks with respect to available tools, technologies, standards, algorithms and databases for generating, representing and analyzing graphical data. As a wide variety of algorithms have been developed to analyze and compare networks, this book is a timely resource. Presents recent advances in biological network analysis, combining Graph Theory, Graph Analysis, and various network models Discusses three major biological networks, including Gene Regulatory Networks (GRN), Protein-Protein Interaction Networks (PPIN) and Human Brain Connectomes Includes a discussion of various graph theoretic and data analytics approaches

Artificial Intelligence in Bioinformatics
  • Language: en
  • Pages: 270

Artificial Intelligence in Bioinformatics

  • Type: Book
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  • Published: 2022-05-12
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  • Publisher: Elsevier

Artificial Intelligence in Bioinformatics: From Omics Analysis to Deep Learning and Network Mining reviews the main applications of the topic, from omics analysis to deep learning and network mining. The book includes a rigorous introduction on bioinformatics, also reviewing how methods are incorporated in tasks and processes. In addition, it presents methods and theory, including content for emergent fields such as Sentiment Analysis and Network Alignment. Other sections survey how Artificial Intelligence is exploited in bioinformatics applications, including sequence analysis, structure analysis, functional analysis, protein classification, omics analysis, biomarker discovery, integrative bioinformatics, protein interaction analysis, metabolic networks analysis, and much more. Bridges the gap between computer science and bioinformatics, combining an introduction to Artificial Intelligence methods with a systematic review of its applications in the life sciences Brings readers up-to-speed on current trends and methods in a dynamic and growing field Provides academic teachers with a complete resource, covering fundamental concepts as well as applications

Data Management of Protein Interaction Networks
  • Language: en
  • Pages: 145

Data Management of Protein Interaction Networks

Current PPI databases do not offer sophisticated querying interfaces and especially do not integrate existing information about proteins. Current algorithms for PIN analysis use only topological information, while emerging approaches attempt to exploit the biological knowledge related to proteins and kinds of interaction, e.g. protein function, localization, structure, described in Gene Ontology or PDB. The book discusses technologies, standards and databases for, respectively, generating, representing and storing PPI data. It also describes main algorithms and tools for the analysis, comparison and knowledge extraction from PINs. Moreover, some case studies and applications of PINs are also discussed.

Microarray Data Analysis
  • Language: en
  • Pages: 226

Microarray Data Analysis

  • Type: Book
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  • Published: 2019-03-13
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  • Publisher: Humana Press

This volume covers a large area, from the description of methodologies for data analysis to the real application. Chapters focus on methodologies for preprocessing of microarray data, a survey of miRNA Data analysis, Cloud-based approaches, application of data mining techniques for data analysis, biclustering to query different datasets, web-based tool to analyze the evolution of miRNA clusters, application of biclustering to mine patterns of co-regulated genes ontologies, microarray and proteomic Data, Gene Regulatory Network Inference, Gene Regulatory Network methods, analysis of Mouse data for metabolomics studies, analysis of microRNA data in Multiple Myeloma, microarray data analysis in Gliobastomas, and microRNA data in Cardiogenesis.Written for the Methods in Molecular Biology series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Microarray Data Analysis: Methods and Applications, Second Edition aims to ensure successful results in the further study of this vital field.

Handbook of Research on Computational Grid Technologies for Life Sciences, Biomedicine, and Healthcare
  • Language: en
  • Pages: 960

Handbook of Research on Computational Grid Technologies for Life Sciences, Biomedicine, and Healthcare

  • Type: Book
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  • Published: 2009-05-31
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  • Publisher: IGI Global

"This book provides methodologies and developments of grid technologies applied in different fields of life sciences"--Provided by publisher.

Advances in Neural Networks
  • Language: en
  • Pages: 539

Advances in Neural Networks

  • Type: Book
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  • Published: 2016-06-18
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  • Publisher: Springer

This carefully edited book is putting emphasis on computational and artificial intelligent methods for learning and their relative applications in robotics, embedded systems, and ICT interfaces for psychological and neurological diseases. The book is a follow-up of the scientific workshop on Neural Networks (WIRN 2015) held in Vietri sul Mare, Italy, from the 20th to the 22nd of May 2015. The workshop, at its 27th edition became a traditional scientific event that brought together scientists from many countries, and several scientific disciplines. Each chapter is an extended version of the original contribution presented at the workshop, and together with the reviewers’ peer revisions it a...

An Introduction to Undergraduate Research in Computational and Mathematical Biology
  • Language: en
  • Pages: 479

An Introduction to Undergraduate Research in Computational and Mathematical Biology

Speaking directly to the growing importance of research experience in undergraduate mathematics programs, this volume offers suggestions for undergraduate-appropriate research projects in mathematical and computational biology for students and their faculty mentors. The aim of each chapter is twofold: for faculty, to alleviate the challenges of identifying accessible topics and advising students through the research process; for students, to provide sufficient background, additional references, and context to excite students in these areas and to enable them to successfully undertake these problems in their research. Some of the topics discussed include: • Oscillatory behaviors present in ...

New Trends in Databases and Information Systems
  • Language: en
  • Pages: 433

New Trends in Databases and Information Systems

  • Type: Book
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  • Published: 2018-08-30
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  • Publisher: Springer

This book constitutes the thoroughly refereed short papers, workshops and doctoral consortium papers of the 22th European Conference on Advances in Databases and Information Systems, ADBIS 2018, held in Budapest, Hungary, in September 2018. The 20 full and the 4 short workshop papers as well as the 3 doctoral consortium papers were carefully reviewed and selected from 54 submissions to the workshops and 6 submissions to the doctoral consortium. Furthermore, there are 10 short papers included, which were accepted for the main conference. The papers are organized according to the 6 workshops and the doctoral consortium: ADBIS 2018 short papers; First Workshop on Advances on Big Data Management...

Computational Science – ICCS 2021
  • Language: en
  • Pages: 722

Computational Science – ICCS 2021

The six-volume set LNCS 12742, 12743, 12744, 12745, 12746, and 12747 constitutes the proceedings of the 21st International Conference on Computational Science, ICCS 2021, held in Krakow, Poland, in June 2021.* The total of 260 full papers and 57 short papers presented in this book set were carefully reviewed and selected from 635 submissions. 48 full and 14 short papers were accepted to the main track from 156 submissions; 212 full and 43 short papers were accepted to the workshops/ thematic tracks from 479 submissions. The papers were organized in topical sections named: Part I: ICCS Main Track Part II: Advances in High-Performance Computational Earth Sciences: Applications and Frameworks; ...

Bioinformatics and Biomedical Engineering
  • Language: en
  • Pages: 485

Bioinformatics and Biomedical Engineering

This volume constitutes the proceedings of the 9th International Work-Conference on IWBBIO 2020, held in Maspalomas, Gran Canaria, Spain, in June 2022. The total of 75 papers presented in the proceedings, was carefully reviewed and selected from 212 submissions. The papers cover the latest ideas and realizations in the foundations, theory, models, and applications for interdisciplinary and multidisciplinary research encompassing disciplines of computer science, mathematics, statistics, biology, bioinformatics, and biomedicine.