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New Frontiers: Extracellular Vesicles
The field of extracellular vesicles (EVs) has progressed immensely in recent times with evidences highlighting their importance in physiology and pathology. This book entails extensive reflective literature on many subtypes of EVs including exosomes, exomeres, ectosomes, apoptotic vesicles, bacterial EVs and fungal EVs. The book further discusses the biogenesis and secretion of these EVs, detailing the biological pathways and proteins involved. Research investigating the biological functions of EVs is rapidly increasing and the current knowledge around their role in progression of diseases such as cancer, neurodegeneration and metabolic disorders is discussed in multiple chapters. The implic...
Functional Coherence of Molecular Networks in Bioinformatics
Molecular networks provide descriptions of the organization of various biological processes, including cellular signaling, metabolism, and genetic regulation. Knowledge on molecular networks is commonly used for systems level analysis of biological function; research and method development in this area has grown tremendously in the past few years. This book will provide a detailed review of existing knowledge on the functional characterization of biological networks. In 15 chapters authored by an international group of prolific systems biology and bioinformatics researchers, it will organize, conceptualize, and summarize the existing core of research results and computational methods on understanding biological function from a network perspective.
How Can Secretomics Help Unravel the Secrets of Plant-Microbe Interactions?
Secretomics describes the global study of proteins that are secreted by a cell, a tissue or an organism, and has recently emerged as a field for which interest is rapidly growing. The term secretome was first coined at the turn of the millennium and was defined to comprise not only the native secreted proteins released into the extracellular space but also the components of machineries for protein secretion. Two secretory pathways have been described in fungi: i) the canonical pathway through which proteins bearing a N-terminal peptide signal can traverse the endoplasmic reticulum and Golgi apparatus, and ii) the unconventional pathway for proteins lacking a peptide signal. Protein secretion...
Data Management of Protein Interaction Networks
Current PPI databases do not offer sophisticated querying interfaces and especially do not integrate existing information about proteins. Current algorithms for PIN analysis use only topological information, while emerging approaches attempt to exploit the biological knowledge related to proteins and kinds of interaction, e.g. protein function, localization, structure, described in Gene Ontology or PDB. The book discusses technologies, standards and databases for, respectively, generating, representing and storing PPI data. It also describes main algorithms and tools for the analysis, comparison and knowledge extraction from PINs. Moreover, some case studies and applications of PINs are also discussed.
BIOMAT 2009
Macrophages and tumours : friends or foe? / H.M. Byrne, M.R. Owen -- Tumour cells proliferation and migration under the influence of their microenvironment / A. Friedman, Yangjin Kim -- Phenomenological study of the growth rate of transformed vero cells, changes in the growth mode and fractal behaviour of colony contours / M.A.C. Huergo [und weitere] -- Evidence of deterministic evolution in the immunological memory process / A. de Castro [und weitere] -- Mathematical and computer modelling of control mechanisms of hierarchical molecular-genetic systems / H.B. Nabievich [und weitere] -- Monte Carlo simulation of protein models : at the interface between statistical physics and biology / T. W...
Generating Random Networks and Graphs
This book describes how to correctly and efficiently generate random networks based on certain constraints. Being able to test a hypothesis against a properly specified control case is at the heart of the 'scientific method'.
