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The problem of inducing, learning or inferring grammars has been studied for decades, but only in recent years has grammatical inference emerged as an independent field with connections to many scientific disciplines, including bio-informatics, computational linguistics and pattern recognition. This book meets the need for a comprehensive and unified summary of the basic techniques and results, suitable for researchers working in these various areas. In Part I, the objects of use for grammatical inference are studied in detail: strings and their topology, automata and grammars, whether probabilistic or not. Part II carefully explores the main questions in the field: What does learning mean? How can we associate complexity theory with learning? In Part III the author describes a number of techniques and algorithms that allow us to learn from text, from an informant, or through interaction with the environment. These concern automata, grammars, rewriting systems, pattern languages or transducers.
This book constitutes the refereed proceedings of the 8th International Colloquium on Grammatical Inference, ICGI 2006. The book presents 25 revised full papers and 8 revised short papers together with 2 invited contributions, carefully reviewed and selected. The topics discussed range from theoretical results of learning algorithms to innovative applications of grammatical inference and from learning several interesting classes of formal grammars to applications to natural language processing.
This book constitutes the refereed proceedings of the 8th International Conference on Language and Automata Theory and Applications, LATA 2014, held in Madrid, Spain in March 2014. The 45 revised full papers presented together with 4 invited talks were carefully reviewed and selected from 116 submissions. The papers cover the following topics: algebraic language theory; algorithms on automata and words; automata and logic; automata for system analysis and program verification; automata, concurrency and Petri nets; automatic structures; combinatorics on words; computability; computational complexity; descriptional complexity; DNA and other models of bio-inspired computing; foundations of fini...
High-throughput sequencing and functional genomics technologies have given us the human genome sequence as well as those of other experimentally, medically, and agriculturally important species, thus enabling large-scale genotyping and gene expression profiling of human populations. Databases containing large numbers of sequences, polymorphisms, structures, metabolic pathways, and gene expression profiles of normal and diseased tissues are rapidly being generated for human and model organisms. Bioinformatics is therefore gaining importance in the annotation of genomic sequences; the understanding of the interplay among and between genes and proteins; the analysis of the genetic variability of species; the identification of pharmacological targets; and the inference of evolutionary origins, mechanisms, and relationships. This proceedings volume contains an up-to-date exchange of knowledge, ideas, and solutions to conceptual and practical issues of bioinformatics by researchers, professionals, and industry practitioners at the 6th Asia-Pacific Bioinformatics Conference held in Kyoto, Japan, in January 2008./a
This contributed volume convenes selected, peer-reviewed works presented at the BIOMAT 2021 International Symposium, which was virtually held on November 1–5, 2021, with its organization staff based in Rio de Janeiro, Brazil. In this volume the reader will find applications of mathematical modeling on health, ecology, and social interactions, addressing topics like probability distributions of mutations in different cancer cell types; oscillations in biological systems; modeling of marine ecosystems; mathematical modeling of organs and tissues at the cellular level; as well as studies on novel challenges related to COVID-19, including the mathematical analysis of a pandemic model targeting...
This book constitutes the refereed proceedings of the First International Bioinformatics Research and Development Conference, BIRD 2007, held in Berlin, Germany in March 2007. The 36 revised full papers are organized in topical sections on microarray and systems biology and networks, medical, SNPs, genomics, systems biology, sequence analysis and coding, proteomics and structure, databases, Web and text analysis.
This book constitutes the refereed proceedings of the 5th International Colloquium on Grammatical Inference, ICGI 2000, held in Lisbon, Portugal in September 2000. The 24 revised full papers presented were carefully reviewed and selected from 35 submissions. The papers address topics like machine learning, automata, theoretical computer science, computational linguistics, pattern recognition, artificial neural networks, natural language acquisition, computational biology, information retrieval, text processing, and adaptive intelligent agents.
High-throughput sequencing and functional genomics technologies have given us a draft human genome sequence and have enabled large-scale genotyping and gene expression profiling of human populations. Databases containing large numbers of sequences, polymorphisms, and gene expression profiles of normal and diseased tissues in different clinical states are rapidly being generated for human and model organisms. Bioinformatics is thus rapidly growing in importance in the annotation of genomic sequences, in the understanding of the interplay between genes and proteins, in the analysis of the genetic variability of species, and so on. This proceedings contains an up-to-date exchange of knowledge, ideas, and solutions to conceptual and practical issues of bioinformatics, by researchers, professionals, and industrial practitioners at the 4th Asia-Pacific Bioinformatics Conference held in Taipei in February 2006.
Molecular computing is a rapidly growing subarea of natural computing. On the one hand, molecular computing is concerned with the use of bio-molecules for the purpose of actual computations while, on the other hand, it attempts to understand the computational nature of molecular processes going on in living cells. The book presents a unique and authorative state-of-the-art survey on current research in molecular computing: 30 papers by leading researchers in the area are drawn together on the occasion of the 70th birthday of Tom Head, a pioneer in molecular computing. Among the topics addressed are molecular tiling, DNA self-assembly, splicing systems, DNA-based cryptography, DNA word design, gene assembly, and membrane computing.
This book constitutes the refereed proceedings of the 18th Conference on Foundations of Software Technology and Theoretical Computer Science, FSTTCS'98, held in Chennai, India, in December 1998. The 28 revised full papers presented were carefully selected from a total of 93 submissions; also included are six invited contributions. The papers deal with theoretical topics ranging from discrete mathematics and algorithmic aspects to software engineering, program semantics and mathematical logic.