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The Phylogenetic Handbook
The Phylogenetic Handbook is a broad, hands on guide to theory and practice of nucleotide and protein phylogenetic analysis. This second edition includes six new chapters, covering topics such as Bayesian inference, tree topology testing and the impact of recombination on phylogenies, as well as a detailed section on molecular adaptation. The book has a stronger focus on hypothesis testing than the previous edition, with more extensive discussions on recombination analysis, detecting molecular adaptation and genealogy-based population genetics. Many chapters include elaborate practical sections, which have been updated to introduce the reader to the most recent versions of sequence analysis and phylogeny software, including BLAST, FastA, Clustal, T-coffee, Muscle, DAMBE, Tree-puzzle, Phylip, MEGA, PAUP*, IQPNNI, CONSEL, ModelTest, Prottest, PAML, HYPHY, MrBayes, BEAST, LAMARC, SplitsTree, and RDP. Many analysis tools are described by their original authors, resulting in clear explanations that constitute an ideal teaching guide for advanced-level undergraduate and graduate students.
Designed for Habitat
If you're looking for ways to give back to your community, then this book, the first to profile thirteen projects designed and built by architects and Habitat for Humanity, will help. Detailed plans, sections, and photographs show you how these projects came about, the strategies used by each team to approach the design and construction process, and the obstacles they overcame to realize a successful outcome. The lessons and insights, presented here will aid you, whether you're an architect, architecture student, Habitat affiliate leader, or an affordable housing advocate. Located all across the United States, these projects represent the full spectrum of Habitat for Humanity affiliates, from large urban affiliates to small rural programs. These cases illustrate a broad range of innovative approaches to energy performance, alternative construction strategies, and responses to site context. And each house demonstrates that design quality need not fall victim to the rigorous imperatives of cost, delivery, and financing.
Cuban Studies 18
Essays in volume 18 include discussions of Cuba's approach to the Latin American debt crisis, its two-century-old race problem and its impact on Cuba's relations with Africa, differences between urban and rural living conditions and development, and the recent housing situation in Cuba. Examinations of scholarly research include a survey of major historical works on Cuba ofver the past twenty-five years and an analysis of how the revolution has affected the scholar's craft and access to manuscripts and archives. The Debate section features comments on discussions in Cuban Studies 17 of sex and gender relations in today's Cuba, as well as the ongoing issue of Cuba's economic planning and management system.
The Economics of Cuban Sugar
Sugar, the backbone of the Cuban economic life for centuries, continues to dominate the economy of socialist Cuba. After initial attempts at diversification following the Revolution, the Cuban regime rehabilitated the sugar industry in 1965, making the country again vulnerable to swings in world market prices and the dangers of overdependence on a single agricultural product.Perez-L—pez examines the various efforts at economic planning in the years following the Revolution and provides in-depth analysis of aspects particular to the sugar industry: cultivation, mechanization, energy and transportation, refining and the manufacture of sugar derivatives, production costs, and foreign trade.
GAIA, un programari d anàlisi metagenòmica
La metagenòmica és l'estudi genètic d'una comunitat microbiana, i per tant s'hi inclouen totes les espècies que hi habiten, generant així perfils de diversitat biològica.L'anàlisi de les dades obtingudes proporcionen una quantitat desorbitada d'informació, que serà tractada amb eines bioinformàtiques.GAIA és una plataforma web que permet realitzar l' anàlisis de dades metagenòmiques, metatranscriptòmiques i amplicon de manera simplificada per a l'usuari.* Amplicon: s'usa un gen diana com 16s rRNA.* Metagenòmics: tot el genoma de la mostra, DNA.* Metatranscriptòmics: tots els transcriptomes
Bioinformatics Research and Applications
This book constitutes the refereed proceedings of the 9th International Symposium on Bioinformatics Research and Applications, ISBRA 2013, held in Charlotte, NC, USA, in May 2013. The 25 revised full papers presented together with 4 invited talks were carefully reviewed and selected from 46 submissions. The papers cover a wide range of biomedical databases and data integration, high-performance bio-computing, biomolecular imaging, high-throughput sequencing data analysis, bio-ontologies, molecular evolution, comparative genomics and phylogenomics, molecular modeling and simulation, pattern discovery and classification, computational proteomics, population genetics, data mining and visualization, software tools and applications.
INTRODUCCIÓ A LES TÈCNIQUES DE SEQUENCIACIÓ I BIOINFORMÀTICA (NEXT GENERATION SEQUENCING)
Un llibre introductori per entendre la bioinformàtica i les tècniques modernes desequenciació (Next Generation Sequenting).Next Generation Sequencing (NGS) és un terme per identificar una tecnologiade seqüenciació de l'ADN i ARN que ha revolucionat el món de la genómica.NGS engloba totes les tecnologies destinades a dur a terme la seqüenciaciómassiva a gran escala de qualsevol àcid nucleic a la actualitat.Les possibilitats de la investigació mèdica i biològica s'han multiplicat durant lesdues últimes dècades amb les tècniques de seqüenciació i especialment ambNGS. NGS és una tècnica molt potent que permet la detecció de tots els tipusde variacions de l'ADN (petites substitucions, delecions o insercions, així comgrans delecions genòmiques d'exons, inversions o translocacions).Aquest llibre ofereix d'una manera succinta què és i com es realitza laseqüenciació amb NGS.
Healthgrid Applications and Core Technologies
This book presents the proceedings of HealthGrid 2010, the latest in the annual open forum for the integration of grid technologies, e science and e health methods and their application in biomedicine and healthcare. Previous conferences have highlighted the need to involve all actors, such as physicians, scientists and technologists, and have served to demonstrate the usefulness of grids to potential application domains, at least at the prototype level. More recently, cloud computing seems set to make an impact as a paradigm more readily acceptable in the practice of healthcare informatics, whilst grids may remain the infrastructure of choice for researchers. Included in this volume are the...
5th International Conference on Practical Applications of Computational Biology & Bioinformatics
The growth in the Bioinformatics and Computational Biology fields over the last few years has been remarkable and the trend is to increase its pace. In fact, the need for computational techniques that can efficiently handle the huge amounts of data produced by the new experimental techniques in Biology is still increasing driven by new advances in Next Generation Sequencing, several types of the so called omics data and image acquisition, just to name a few. The analysis of the datasets that produces and its integration call for new algorithms and approaches from fields such as Databases, Statistics, Data Mining, Machine Learning, Optimization, Computer Science and Artificial Intelligence. W...
