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The European Molecular Biology Open Source Software Suite (EMBOSS) is the premier Open Source package of tools for molecular biology analysis and bioinformatics. Practical Bioinformatics with EMBOSS is the official and definitive guide to the package. It includes comprehensive information and practical instructions, including an in-depth tutorial and guidelines on common ways to use the package. It is written specifically for biologists, bioinformaticians and other end-users, and no prior experience with EMBOSS is assumed.
"Provides an in-depth explanation of the C and C++ programming languages along with the fundamentals of object oriented programming paradigm"--
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The European Molecular Biology Open Software Suite (EMBOSS) is a high quality, well documented package of open source software tools for molecular biology. EMBOSS includes extensive and extensible C programming libraries, providing a powerful and robust toolkit for developing new bioinformatics tools from scratch. The EMBOSS Developer's Guide is the official and definitive guide to developing software under EMBOSS. It includes comprehensive reference information and guidelines, including step-by-step instructions and real-world code examples: • Learn how to write fully-featured tools guided by the people who developed EMBOSS • Step-by-step guide to writing EMBOSS applications, illustrated with functional, deployed code • ACD file development - learn how to customise existing tools without coding, or design and write entirely new application interfaces • EMBOSS API programming guidelines - quickly master application development • Wrapping and porting applications under EMBOSS - learn how to incorporate third-party tools
For fast, easy modeling, this practical guide provides all the essential information you need to know. A wide range of topics is covered, including custom protocols, programming in C++, External Model Access (EMA) modeling and co-simulation with external systems, giving you the guidance not provided in the OPNET documentation. A set of high-level wrapper APIs is also included to simplify programming custom OPNET models, whether you are a newcomer to OPNET or an experienced user needing to model efficiently. From the basic to the advanced, you will find topics are easy to follow with theory kept to a minimum, many practical tips and answers to frequently asked questions spread throughout the book and numerous step-by-step case studies and real-world network scenarios included.